Sequence and Bioinformatics Analysis on MSTN Gene of the Hybrid Grouper Derived from(Epinephelus fuscoguttatus×Epinephelus polyphekadion)
刊名 Agricultural Biotechnology
作者 Liu CAO ,Pan CEHN, Youhua ZHANG, Xiaomei FU ,Hai Huang
作者单位 Key Laboratory of Utilization and Conservation for Tropical Marine Bioresources of Ministry of Education Yazhou Bay Innovation Institute Hainan Key Laboratory for Conservation and Utilization of Tropical Marine Fishery Resources Hainan Tropical Ocean University
DOI DOI:10.19759/j.cnki.2164-4993.2023.03.010
年份 2023
刊期 3
页码 46-49,54
关键词 GROUPER, MSTN gene, Growth traits, Gene structure
摘要 [Objectives]This study aimed to investigate the sequence structure and function of Myostatin(MSTN)gene in the hybrid grouper(Epinephelus fuscoguttatus,♀×Epinephelus polyphekadion,♂).[Methods]Genetic DNA samples were extracted from the caudal fins of the hybrid grouper and its parents to amplify their MSTN genes.Then,MSTN gene sequences were analyzed using bioinformatics tools to predict their protein structures and functions.[Results]The hybrid grouper and its parents shared the same MSTN gene structure,consisting of three exons and two introns.Nucleotide sequence of the gene could be translated into 376 amino acids,including an N-terminal signal peptide,a proteolytic processing site(RXXR motif),and nine conserved cysteine residues at C-terminal,which were the typical features of transforming growth factor beta(TGF-β)superfamily proteins.Alignment of protein sequence showed that MSTN was highly conserved between the hybrid grouper and its parents.Especially,exon 3,an important functional domain,exhibited a sequence similarity of 100%among them.In addition,four variable amino acid residues were detected in exon 2 at positions 141,153,185 and 186 in the hybrid grouper,but they did not affect the secondary structure of the protein.[Conclusion]These results will provide molecular information for future investigation on the growth and heterosis of hybrid grouper species,and on the roles of MSTN gene in regulating the growth traits of the hybrid grouper.